-- ecbuild 3.7.2 /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/ecbuild-3.7.2-22pgyb5/share/ecbuild/cmake -- cmake 3.23.1 /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/cmake-3.23.1-lluvdgi/bin/cmake -- --------------------------------------------------------- -- Added C flag [-pipe] -- Added CXX flag [-pipe] -- --------------------------------------------------------- -- --------------------------------------------------------- -- [mpas-bundle] (3.0.0) [c8e528a] -- Feature TESTS enabled -- --------------------------------------------------------- -- Skipping bundle project eckit -- --------------------------------------------------------- -- Skipping bundle project fckit -- --------------------------------------------------------- -- Skipping bundle project atlas -- --------------------------------------------------------- -- Skipping bundle project ropp-ufo -- --------------------------------------------------------- -- Skipping bundle project rttov -- --------------------------------------------------------- -- Adding bundle project oops -- Updating oops to TAG 78434af... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/oops marked NOREMOTE : Skipping git fetch -- git checkout 78434af @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/oops -- --------------------------------------------------------- -- [oops] (1.10.0) [78434af] -- Feature TESTS enabled -- Could NOT find MKL (missing: MKL_LIBRARIES MKL_INCLUDE_DIRS) -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX Fortran -- Found MPI: TRUE (found version "3.1") found components: C CXX Fortran -- Found MPI: TRUE (found version "3.1") -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: C Fortran -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so -- Found Boost: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/boost-1.84.0-jemdoe4/lib/cmake/Boost-1.84.0/BoostConfig.cmake (found suitable version "1.84.0", minimum required is "1.64.0") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Found addr2line at /usr/bin/addr2line. -- Using this provider for stacktraces: default. -- --------------------------------------------------------- -- Adding bundle project vader -- Updating vader to TAG e3457cb... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/vader marked NOREMOTE : Skipping git fetch -- git checkout e3457cb @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/vader -- --------------------------------------------------------- -- [vader] (1.7.0) [e3457cb] -- Feature TESTS enabled -- VADER variables -- - ENABLE_VADER_DOC: OFF -- Found MPI: TRUE (found version "3.1") found components: C Fortran -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX Fortran -- Found MPI: TRUE (found version "3.1") found components: CXX Fortran -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Found MPI: TRUE (found version "3.1") -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: C Fortran -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so -- GSW NOT FOUND: Excluding Marine Recipes -- --------------------------------------------------------- -- Adding bundle project saber -- Updating saber to TAG e93b14f... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/saber marked NOREMOTE : Skipping git fetch -- git checkout e93b14f @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/saber -- --------------------------------------------------------- -- [saber] (1.10.0) [e93b14f] -- Feature TESTS enabled -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX Fortran -- Found MPI: TRUE (found version "3.1") found components: Fortran -- Found MPI: TRUE (found version "3.1") -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: C Fortran -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Could NOT find MKL (missing: MKL_LIBRARIES MKL_INCLUDE_DIRS) -- Found Boost: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/boost-1.84.0-jemdoe4/lib/cmake/Boost-1.84.0/BoostConfig.cmake (found version "1.84.0") -- Could NOT find MKL (missing: MKL_LIBRARIES MKL_INCLUDE_DIRS) -- SABER block GSI is NOT enabled -- SABER block FastLAM spectral layer is enabled -- SABER block SPECTRALB is enabled -- SABER instrumentation is not enabled -- Offline code coverage is not enabled -- Setup QUENCH data links -- SABER tests activated: -- - TIER 1 base -- - TIER 1 FastLAM-specific -- - TIER 1 FastLAM-specific - FFTW -- - TIER 1 SPECTRALB-specific -- - TIER 1 VADER-specific -- Setup SABER directories and links -- Tests parallel configuration: MPI: 1 / OMP: 1 -- Tests parallel configuration: MPI: 2 / OMP: 1 -- Tests parallel configuration: MPI: 4 / OMP: 1 -- SABER documentation is not enabled -- --------------------------------------------------------- -- Adding bundle project crtm -- Updating crtm to TAG b1ff8b4... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/crtm marked NOREMOTE : Skipping git fetch -- git checkout b1ff8b4 @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/crtm -- [crtm] (3.1.1) [c8e528a] -- Found OpenMP: TRUE (found version "4.5") found components: Fortran -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: Fortran -- FindNetCDF defines targets: -- - NetCDF::NetCDF_Fortran [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so] -- Building tests for CRTM v3.1.1. -- Downloading CRTM coeffs files from: https://bin.ssec.wisc.edu/pub/s4/CRTM//fix_REL-3.1.1.0.tgz to /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/test_data/3.1.1/fix_REL-3.1.1.0.tgz -- Checking if /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/test_data/3.1.1/fix_REL-3.1.1.0 already exists... -- Files have already been untarred. Skipping. -- Configuration summary -- Project name : crtm -- Project version : 3.1.1 -- Fortran compiler : /opt/ohpc/pub/compiler/gcc/9.4.0/bin/gfortran -- Fortran compiler flags : -D_REAL8_ -ffree-line-length-none -- Build type : Release -- Fortran compiler flags for release : -O3 -funroll-all-loops -fopenmp -finline-functions -- --------------------------------------------------------- -- Adding bundle project ioda-data -- Updating ioda-data to TAG a8c2bb3... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ioda-data marked NOREMOTE : Skipping git fetch -- git checkout a8c2bb3 @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ioda-data -- --------------------------------------------------------- -- Adding bundle project ioda -- Updating ioda to TAG 53f83a2... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ioda marked NOREMOTE : Skipping git fetch -- git checkout 53f83a2 @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ioda -- --------------------------------------------------------- -- [ioda] (2.9.0) [53f83a2] -- Feature TESTS enabled -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: C CXX Fortran -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: Fortran -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so -- Found Boost: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/boost-1.84.0-jemdoe4/lib/cmake/Boost-1.84.0/BoostConfig.cmake (found suitable version "1.84.0", minimum required is "1.64.0") -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") missing components: CXX -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_CXX_CONFIG_EXECUTABLE [NetCDF_CXX_CONFIG_EXECUTABLE-NOTFOUND] -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_abiclr.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_ahiclr.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_aircraft.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_aircraft_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_airs.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_altimeter.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_amsr.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_amsub.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_ascatsm.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_aod.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_aod_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_aod_write_testdatasets.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_atms.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_atms_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_atovs.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_atovs_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_cris.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_crisfsr.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_geocloud.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_gmihigh.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_gmihigh_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_gmilow.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_gnssro.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_gnssro_profile.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_groundgps.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_hirasfsr.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_hloswind.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_iasi.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_iasi_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_mwri.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_mwsfy3.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_oceancolour.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_oceansound.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_oceansound_truncate_profiles.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_radar_doppler_wind.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_satsst.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sattcwv.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_satwind.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_scatwind.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_scatwindchosen_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_seaice.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_seviriasr.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_seviriclr.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sonde.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sonde_history.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sonde_mixed.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sonde_time_displacement.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sonde_truncate_profiles.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sonde_write.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_sonde_write_mixed.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_ssmis.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_surface.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_surfacecloud.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//iodatest_odb_surfacesst.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_default_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_aircraft_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_gnssro_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_gnssro_profile_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_oceansound_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_radiance_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_sonde_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_surface_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//odb_surfacesst_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ioda/share/test/testinput//validation//ObsSpace.yaml -- Use test data from ioda-data repository -- --------------------------------------------------------- -- Adding bundle project ufo-data -- Updating ufo-data to TAG 9f49003... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ufo-data marked NOREMOTE : Skipping git fetch -- git checkout 9f49003 @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ufo-data -- --------------------------------------------------------- -- [ufo_data] (1.10.0) [9f49003] -- Feature TESTS enabled -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX Fortran -- Found Boost: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/boost-1.84.0-jemdoe4/lib/cmake/Boost-1.84.0/BoostConfig.cmake (found version "1.84.0") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: C CXX Fortran -- --------------------------------------------------------- -- Adding bundle project ufo -- Updating ufo to TAG 92ccfb2... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ufo marked NOREMOTE : Skipping git fetch -- git checkout 92ccfb2 @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/ufo -- --------------------------------------------------------- -- [ufo] (1.10.0) [92ccfb2] -- Feature TESTS enabled -- Found MPI: TRUE (found version "3.1") found components: C CXX Fortran -- Found MPI: TRUE (found version "3.1") -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: C Fortran -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX Fortran -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: C CXX Fortran -- CRTM FOUND; Including CRTM Observation Operator (3.1.1) -- RTTOV NOT FOUND; Excluding RTTOV Radiance Observation Operator -- GSW NOT FOUND: Excluding Marine Observation Operators -- ROPP NOT FOUND: Excluding GNSSRO Bending angle ROPP Operators -- GEOS-AERO NOT FOUND: Excluding AOD operator from GEOS -- OASIM NOT FOUND: Excluding Ocean Atmosphere Spectral Irradiance Model -- Skipping download of test data from https://bin.ssec.wisc.edu/pub/s4/CRTM/fix_REL-3.1.0.2.tgz since it already exists -- Use test data from ufo-data repository -- Running ufo tests for tiers up to and including tier 1 -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/auxillary -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/auxillary/IASI_EmisEigenVec.dat -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/gnssro -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/gnssro/gnssro_bmatrix.txt -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/rttov -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/rttov/gmihigh_bmatrix_70_test.dat -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/rttov/amsr_bmatrix_70_test.dat -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/rttov/ssmis_bmatrix_70_test.dat -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/rttov/atovs_bmatrix_70_test.dat -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/rttov/iasi_bmatrix_70_test.dat -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/bmatrix/rttov/atms_bmatrix_70_test.dat -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/namemap -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/namemap/test_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/namemap/bayesian_name_map.yaml -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/gnssro -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/gnssro/gnssro_ba_rmatrix.nl -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/gnssro/gnssro_ba_rmatrix_latitude.nl -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/gnssro/gnssro_ba_rmatrix_latitude.nc4 -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/gnssro/gnssro_ba_rmatrix_avtemp.nl -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/rttov -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/rttov/ssmis_dmspf17_rmatrix_test.nc4 -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/rttov/atovs_metopb_rmatrix_test.nc4 -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/rttov/atms_noaa_20_rmatrix_test.nc4 -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/rttov/amsr_gcomw1_rmatrix_test.nc4 -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/rttov/gmihigh_gpm_rmatrix_test.nc4 -- Up-to-date: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/ufo/resources/rmatrix/rttov/iasi_metopb_rmatrix_test.nc4 -- ESMFMKFILE not defined. This is the path to esmf.mk file. Without this filepath, ESMF_FOUND will always be FALSE. -- Could NOT find ESMF (missing: ESMF_LIBRARY_LOCATION ESMF_INTERFACE_LINK_LIBRARIES ESMF_F90COMPILEPATHS) (Required is at least version "8.3.0") -- --------------------------------------------------------- -- Adding bundle project MPAS -- Updating MPAS to TAG c314013... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/MPAS marked NOREMOTE : Skipping git fetch -- git checkout c314013 @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/MPAS -- [OPTION] MPAS_CORES: init_atmosphere;atmosphere -- [OPTION] MPAS_DOUBLE_PRECISION: ON -- [OPTION] MPAS_PROFILE: OFF -- [OPTION] MPAS_OPENMP: OFF -- [OPTION] BUILD_SHARED_LIBS: ON -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: Fortran -- Found MPI: TRUE (found version "3.1") found components: Fortran -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: Fortran C -- FindNetCDF [/mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/MPAS/cmake/Modules/FindNetCDF.cmake]: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so -- FindPnetCDF: -- - PnetCDF_VERSION [1.12.3] -- - PnetCDF_PREFIX [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/parallel-netcdf-1.12.3-hsxjyo4] -- - PnetCDF Components Found: Fortran;C;CXX -- FindPIO: -- - PIO_PREFIX [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/parallelio-2.6.2-45mlrkk] -- - PIO Components Found: Fortran;C;SHARED -- Configure MPAS for internal ESMF -- Directory already exists, skipping clone -- MPAS-Data source dir: /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/_deps/mpas_data-src -- --------------------------------------------------------- -- Adding bundle project mpas-jedi-data -- Updating mpas-jedi-data to TAG cd98216... -- /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/mpas-jedi-data marked NOREMOTE : Skipping git fetch -- git checkout cd98216 @ /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/mpas-jedi-data -- --------------------------------------------------------- -- Adding bundle project mpas-jedi -- --------------------------------------------------------- -- [mpasjedi] (3.1.0) [2244f67] -- Feature TESTS enabled -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX Fortran -- Found MPI: TRUE (found version "3.1") found components: CXX Fortran -- FindPnetCDF: -- - PnetCDF_VERSION [1.12.3] -- - PnetCDF_PREFIX [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/parallel-netcdf-1.12.3-hsxjyo4] -- - PnetCDF Components Found: Fortran;C;CXX -- Found MPAS: (version: "8.2.1") (components: SHARED;OpenMP;DOUBLE_PRECISION;core_atmosphere;core_init_atmosphere) -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: CXX -- Configure mpas-jedi for internal ESMF -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: Fortran -- Could NOT find MKL (missing: MKL_LIBRARIES MKL_INCLUDE_DIRS) -- FFTW targets: -- FFTW::fftw3 (double precision) [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/fftw-3.3.10-a73cq75/lib/libfftw3.so] -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP_Fortran: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: C CXX Fortran -- Found MPI: TRUE (found version "3.1") -- Found NetCDF: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/include;/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/include (found version "4.9.2") found components: Fortran -- FindNetCDF defines targets: -- - NetCDF_VERSION [4.9.2] -- - NetCDF_PARALLEL [TRUE] -- - NetCDF_C_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/bin/nc-config] -- - NetCDF::NetCDF_C [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-c-4.9.2-6qrnfjj/lib/libnetcdf.so -- - NetCDF_Fortran_CONFIG_EXECUTABLE [/mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/bin/nf-config] -- - NetCDF::NetCDF_Fortran [SHARED] [Root: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth] Lib: /mnt/beegfs/joao.gerd/spack-stack_1.7.0/envs/mpas-bundle/install/gcc/9.4.0/netcdf-fortran-4.6.1-a5pcnth/lib/libnetcdff.so -- Use crtm test data provided by ufo in /mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/code/test-data-release/crtm/fix_REL-3.1.0.2/fix/ -- Use test data from mpas-jedi-data repository -- BRANCH/TAG develop is available in mpas-jedi-data -- --------------------------------------------------------- -- Bundle mpas-bundle -- --------------------------------------------------------- -- --------------------------------------------------------- -- Build summary -- --------------------------------------------------------- -- system : [headnode.egeon.cptec.inpe.br] [Linux-4.18.0-305.25.1.el8_4.x86_64] [linux.64] -- processor : [x86_64] -- endiness : Little Endian -- IEEE [] -- build type : [Release] -- timestamp : [20250407142324] -- install prefix : [/usr/local] -- bin dir : [/usr/local/bin] -- lib dir : [/usr/local/lib64] -- include dir : [/usr/local/include] -- data dir : [/usr/local/share/mpas-bundle] -- cmake dir : [/usr/local/lib64/cmake/mpas-bundle] -- --------------------------------------------------------- -- C -- GNU 9.4.0 -- compiler : /opt/ohpc/pub/compiler/gcc/9.4.0/bin/gcc -- flags : -pipe -O3 -DNDEBUG -- link flags : -- CXX -- GNU 9.4.0 -- compiler : /opt/ohpc/pub/compiler/gcc/9.4.0/bin/g++ -- flags : -pipe -O3 -DNDEBUG -- link flags : -- Fortran -- GNU 9.4.0 -- compiler : /opt/ohpc/pub/compiler/gcc/9.4.0/bin/gfortran -- flags : -O3 -DNDEBUG -funroll-all-loops -finline-functions -- link flags : -- linker : /usr/bin/ld -- ar : /usr/bin/ar -- ranlib : /usr/bin/ranlib -- link flags -- executable [ -Wl,--disable-new-dtags ] -- shared lib [ -Wl,--disable-new-dtags ] -- static lib [ -Wl,--disable-new-dtags ] -- install rpath : $ORIGIN/../lib64 -- common definitions: -- --------------------------------------------------------- -- Feature summary -- --------------------------------------------------------- -- The following features have been enabled: * TESTS, mpas-bundle: Enable the unit tests, oops: Enable the unit tests, vader: Enable the unit tests, saber: Enable the unit tests, ioda: Enable the unit tests, ufo_data: Enable the unit tests, ufo: Enable the unit tests, mpasjedi: Enable the unit tests -- The following OPTIONAL packages have been found: * Python3 * Git * PkgConfig * Perl -- The following REQUIRED packages have been found: * ecbuild (required version >= 3.3.2) * boost_headers (required version == 1.84.0) * Boost * PnetCDF * PIO * MPAS * eckit * fckit * Eigen3 * atlas (required version >= 0.35.0) * jedicmake * BLAS * Threads * LAPACK * oops * vader * FFTW * saber * HDF5 * gsl-lite * udunits (required version >= 2.2.0) * OpenMP * ioda * MPI * NetCDF * crtm * ufo -- The following features have been disabled: * Python, Build Python bindings using pybind11 -- The following OPTIONAL packages have not been found: * nlohmann_json * nlohmann_json_schema_validator * gsibec (required version >= 1.2.1) * odc (required version >= 1.4.6) * bufr (required version >= 12.0.1) * bufr_query * pybind11 * gsw * geos-aero * oasim * ESMF (required version >= 8.3.0) * rttov * ropp-ufo * MKL -- Configuring incomplete, errors occurred! See also "/mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/CMakeFiles/CMakeOutput.log". See also "/mnt/beegfs/thaisa.lopes/mpas_jedi_tutorial/mpasbundlev3_local/build/CMakeFiles/CMakeError.log".